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Genes linked to Alzheimer’s risk, resilience ID’d

Genes in the brain’s immune cells may point to strategy to protect against the disease

by Jim DrydenAugust 14, 2019

Fabia Filipello and Dennis Oakley

An international team of researchers led by scientists at Washington University School of Medicine in St. Louis has identified a pair of genes that influence risk for both late-onset and early-onset Alzheimer’s disease.

Most genes implicated thus far in Alzheimer’s affect neurons that transmit messages, allowing different regions of the brain to communicate with one another. But the newly identified genes affect an entirely different population of cells: the brain’s immune cells. The findings, published online Aug. 14 in the journal Science Translational Medicine, could provide scientists with new targets and a strategy for delaying the onset of Alzheimer’s symptoms.

The genes — known as MS4A4A and TREM2 — operate in the microglia, the brain’s immune cells. They influence Alzheimer’s risk by altering levels of TREM2, a protein that is believed to help microglia cells clear excessive amounts of the Alzheimer’s proteins amyloid and tau from the brain.

“The findings point to a new therapeutic strategy,” said co-senior investigator Carlos Cruchaga, PhD, a professor of psychiatry and director of the NeuroGenomics and Informatics Group. “If we can do something to raise levels of the TREM2 protein in the cerebrospinal fluid, we may be able to protect against Alzheimer’s disease or slow its development.”

In this study, the researchers measured soluble TREM2 levels in the cerebrospinal fluid of 813 older adults, most of whom were ages 55 to 90. Of those subjects, 172 had Alzheimer’s disease, 169 were cognitively normal, and another 183 had early mild cognitive impairment. They also analyzed the participants’ DNA, conducting genomewide association studies to look for regions of the genome that may influence TREM2 levels in the cerebrospinal fluid.

Although variants in TREM2 are found in a very small percentage of patients with Alzheimer’s disease, the gene previously had been linked to the disorder. People who carried those previously identified risk mutations were excluded from the study. Common variants in the MS4A4A gene also had been associated with risk for Alzheimer’s, but this study connects those genes.

“We observed TREM2 risk variants more often in people who had Alzheimer’s or were mildly cognitively impaired, compared with those who were cognitively normal,” said co-senior investigator Celeste Karch, PhD, an assistant professor in the Department of Psychiatry. “It turns out that about 30 percent of the population in the study had variations in the MS4A4A gene that appear to affect their risk for developing Alzheimer’s disease. Some variants protected people from Alzheimer’s or made them more resilient while others increased their risk.”

When the researchers dug further, they noted that variants in the MS4A4A gene cluster linked to an increase in risk for developing Alzheimer’s disease are associated with lower levels of soluble TREM2 protein. The other variant, associated with higher levels of TREM2 in the cerebrospinal fluid, seemed to protect against Alzheimer’s.

The research team validated its results in DNA from another 580 older adults. Once again, they found that higher soluble TREM2 levels in the cerebrospinal fluid seemed protective, while lower levels increased risk. And those protein levels — whether high or low — were linked to variants in the MS4A4A gene.

“For the past several years, we’ve been looking at TREM2 and increasing our focus on the involvement of the brain’s immune cells in Alzheimer’s disease” said another co-senior author, Bruno A. Benitez, MD, an assistant professor of psychiatry. “These findings give us a new therapeutic strategy to pursue, one focusing not only on neurons but on how the microglia may be involved in helping to clear damaging proteins, such as beta amyloid and tau, that are linked to Alzheimer’s disease.”

Those gene variants also may play a role in other diseases of the central nervous system, according to Laura Piccio, MD, PhD, an associate professor of neurology and another co-senior author.

“By combining large genetic and spinal fluid analyses with laboratory work, we have provided strong evidence of a biological link between TREM2 and proteins in the MS4A gene cluster, both of which previously had been associated with Alzheimer’s disease,” Piccio said. “We are beginning to elucidate a molecular pathway in microglia that could be critical not only in Alzheimer’s disease but also in other neurodegenerative and inflammatory diseases in the central nervous system.”

Deming Y, et al. The MS4A gene cluster is a key modulator of soluble TREM2 and Alzheimer disease risk. Science Translational Medicine, published online Aug 14, 2019.

This work was supported by the National Institute on Aging, the National Heart, Lung, and Blood Institute and the National Institute of Mental Health of the National Institutes of Health (NIH). Grant numbers R01 AG044546, P01 AG003991, RF1 AG053303, R01 AG058501, U01 AG058922, K01 AG046374, P50 AG05681, P01 AG026276, R01 HL119813 and T32 MH014877. Additional funding was provided by the Alzheimer’s Association; the Fondazione Italiana Sclerosi Multipla; the National Multiple Sclerosis Society; a Fondazione Veronesi fellowship; the Hope Center for Neurological Disorders and the Danforth Foundation Challenge at Washington University; the Swedish Alzheimer Foundation; the Research Council, Sweden; Hjarnfonden, Sweden; the LUA/ALF project, Vastra Gotalandsregionen, Sweden; the Swedish and European Research Councils; and the UK Dementia Research Institute.

Washington University School of Medicine’s 1,500 faculty physicians also are the medical staff of Barnes-Jewish and St. Louis Children’s hospitals. The School of Medicine is a leader in medical research, teaching and patient care, ranking among the top 10 medical schools in the nation by U.S. News & World Report. Through its affiliations with Barnes-Jewish and St. Louis Children’s hospitals, the School of Medicine is linked to BJC HealthCare.

Jim retired from Washington University in 2023. While at WashU, Jim covered psychiatry and neuroscience, pain and opioid research, orthopedics, diabetes, obesity, nutrition and aging. He formerly worked at KWMU (now St. Louis Public Radio) as a reporter and anchor, and his stories from the Midwest also were broadcast on NPR. Jim hosted the School of Medicine's Show Me the Science podcast, which highlights the outstanding research, education and clinical care underway at the School of Medicine. He has a bachelor's degree in English literature from the University of Missouri-St. Louis.